BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003A12LP1|AL425062
(1072 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig568 1991 0.0
>3x_Contig568
Length = 1982
Score = 1991 bits (1003), Expect = 0.0
Identities = 1031/1037 (99%), Gaps = 3/1037 (0%)
Strand = Plus / Minus
Query: 5 aatttggaaatatacttcaaaatttggaataaaagcccatgagacatatttccacctaaa 64
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1285 aatttggaaatatacttcaaaatttggaataaaagcccatgagatatatttccacctaaa 1226
Query: 65 ttccttacaatatcagagcaccaaatatgcttcaaagatatacattctaatgcgaatagt 124
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1225 ttccttacaatatcagagcaccaaata-gcttcaaagatatacattctaatgcgaatagt 1167
Query: 125 gcgtccattcttatatcgcgtggaactttagtttctgaaagagatagaaactcagacaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 gcgtccattcttatatcgcgtggaactttagtttctgaaagagatagaaactcagacaaa 1107
Query: 185 ctgttaaaagcatacggatcgatttcaaagaatctagagctgacctgagcagggtgaaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 ctgttaaaagcatacggatcgatttcaaagaatctagagctgacctgagcagggtgaaaa 1047
Query: 245 atgacatttatgattgctattgcattgaattttgtttgaattatttgatttctgagttgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 atgacatttatgattgctattgcattgaattttgtttgaattatttgatttctgagttgc 987
Query: 305 atattttcgaaggaatcatcgctgaaggcttttgcaacggttgctcgaagcgagaacttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 atattttcgaaggaatcatcgctgaaggcttttgcaacggttgctcgaagcgagaacttg 927
Query: 365 aaccattcttctctgggtagctccagcattcctctatcaaaaatctgttgcaatgttaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 aaccattcttctctgggtagctccagcattcctctatcaaaaatctgttgcaatgttaat 867
Query: 425 gatttgagctcatccttggagagtttgaagttatgcattttatgagagttagtwtaattc 484
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 866 gatttgagctcatccttggagagtttgaagttatgcattttatgagagtgagtataattc 807
Query: 485 tgtttgcaaggcgatttgacagtatccttatttgtacgtttgtttgatttggtgaaatat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 tgtttgcaaggcgatttgacagtatccttatttgtacgtttgtttgatttggtgaaatat 747
Query: 545 ttatattcaatgcttcctagtttcgagggatactgctttttgtcaaaaaacaaatccacc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ttatattcaatgcttcctagtttcgagggatactgctttttgtcaaaaaacaaatccacc 687
Query: 605 aaagcaaagtgctccattttatcatcggtagtggaagaaggtaggcatagcgctagttct 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aaagcaaagtgctccattttatcatcggtagtggaagaaggtaggcatagcgctagttct 627
Query: 665 aaacttttatctttcatttcatcagtacccataatgcttttgttatcgaaaatattacgt 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aaacttttatctttcatttcatcagtacccataatgcttttgttatcgaaaatattacgt 567
Query: 725 gagacgacatttctttcaccaattgttgctatgactctagcagcaccgagcttaattctg 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gagacgacatttctttcaccaattgttgctatgactctagcagcaccgagcttaattctg 507
Query: 785 aaattaggacagtttaatagagagttcatgacctccaaggaattgtatatcccacgattc 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aaattaggacagtttaatagagagttcatgacctccaaggaattgtatatcccacgattc 447
Query: 845 atagtattattgagtaaacgagtagtgaaagccaaatactcccatacttcgtcttcgtct 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 atagtattattgagtaaacgagtagtgaaagccaaatactcccatacttcgtcttcgtct 387
Query: 905 gttgtgttcattagttccaatttacatccatttttcttccagtctgtagtatcataggag 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gttgtgttcattagttccaatttacatccatttttcttccagtctgtagtatcataggag 327
Query: 965 tatttcttcagtacatttgataagatttcatcgattctatccagaacaggaatcc-aatg 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 326 tatttcttcagtacatttgataagatttcatcgattctatccagaacaggaatccaaatg 267
Query: 1024 tac-aatcatctctcga 1039
||| |||||||||||||
Sbjct: 266 tacaaatcatctctcga 250
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9729
Number of Sequences: 1807
Number of extensions: 9729
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 1072
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1056
effective length of database: 10,329,639
effective search space: 10908098784
effective search space used: 10908098784
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)